Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900312.1_cds_XP_016450384.1_44842
CDS Infomation

[gene=LOC107775195] [db_xref=GeneID:107775195] [protein=protein GLE1-like isoform X2] [protein_id=XP_016450384.1] [location=join(7224..7292,7421..7569,7684..7855,8289..8472,11216..11325,14667..14737,14947..15028,15305..15391,16215..16298,16523..16654,18593..18715,18796..19068)] [gbkey=CDS]
Sequence

ATGGATAAAGTGGGATTAGTAAAAAGTGCTTTATCTGAATTAGCTCATGAGCACCAGCTT
ACTATTGCGGAGGAAATGAGAGATCAACTATCATCACTTGAAGCTGAGTTAATGGATGAA
AATGAGAAGCTTGCCTCCACACTTGAACGGGTTGAGAGAAATATTGAAGCTCAAAGGGAA
ATGAACAGAAAATTTGACATGCAGTACCAACGTAAAATTGCAGAAGCACTTGATGATCAC
CTAACTGCTGTACAAAGGGATCACGAACACAGATCCCAAATTGAAGAAAGGAGAATAAGA
GATGATGCAGCTCGTGAAGAAGCCAAGAGGAAAGAAAAAGCTCTTCATGAAGAAAAAGCC
CGGCAAGAAATGATCAGAGCAGAAGCCAAGGTGCAGGCTAGGCTGGAAGCTGAAAGAGTT
GAAAAGGAAAAAGCCGCAGCTCTGGAAGCTGAGAGGAAAGTAGCAAAAGAAACTGCAGCT
GCTGTGGAGAAGAAGGCATCTGAGTCATTGATGAATGCTCCTTCGGAGGCTAACAAGGTT
CTTAAGGAAGTCACTAGTCATAAACATTCAGTAGGAAACACGATCAGGGTGTCAGAAAAT
GCTCAAAAGCTGGAGGAGAAAAGATTGAAGATTTACAATGAAATAGCTTCACAAAATGAA
GCACTGGGATCGTGTTCTAACAAGGCTTACCGAAAATATGAAATGGAAATAGCCAGGCGA
ATCAGAACTATCACTGGTACAAAAGAAAATGTCAGAGTGAAAGCAGATGAATTAATTAAG
CTAATCAGTGATTCAACATGTCCACAATCCATCAGCATTGCGATGTTTGCACAGAAGGTT
GTGTCCCTGTGTGTGAACCCTACAGGAAGCTTTAACAGTGCCGTCTATGCGTATGGTCGT
GTAATTGTCCTTGTTACTTCAAAGGTCCCTCTTGCCATGGATGTTCTCATAGGCGAGTTG
AATAAAGTTTGCATTTACGCAGTTCCTAAGTACATTATTTACTCAGAGGCAGCATTTCAG
ACAAAAGAAGCTTATTACAAAGCTATTGGCTATGCAGAGGAAGATGGGAAGATAGAAAGT
ACTGATAGTTATGTGGATCGCTTAAGTGCATACATGAAATTATATGGTGCTCTTGTTCAG
ACTGAAGTTGAAGGCTGCCAAAATTTGCATGGCCTCAGAGAAGGTTGGGCATGGATAGCC
AGATTCTTAAATGTTCTCCCAGCAAATTTATATACTGCAGCTGCCTTGCAGGCTTTTCTT
GAAATGGCAGGTTTTGCTCTACACAAAAGATATAAGACACAATTCAGAAAGATGTTGGAT
ATCATTGCTAAAGATTTTCTAACTGCATTGAAAGATCGAGGTGATGCAAAGTTGAACAAG
GTGATTGTGAATATCCGAAACTATATAGAGTCAAATCAGTTCCTGAAGGAACCTGAAGGC
TGGCGCCTCAGGAGTAACTTGGAATCACACAATTTCACTCCAGAGTCAGATCATCAACAG
CAGTATGGTTACCAACAGAATAGATACTATCGCTAG

Peptide Sequence

PEP ID

XP_016450384.1
PEP Infomation

PREDICTED: protein GLE1-like isoform X2 [Nicotiana tabacum]
Sequence

MDKVGLVKSALSELAHEHQLTIAEEMRDQLSSLEAELMDENEKLASTLERVERNIEAQRE
MNRKFDMQYQRKIAEALDDHLTAVQRDHEHRSQIEERRIRDDAAREEAKRKEKALHEEKA
RQEMIRAEAKVQARLEAERVEKEKAAALEAERKVAKETAAAVEKKASESLMNAPSEANKV
LKEVTSHKHSVGNTIRVSENAQKLEEKRLKIYNEIASQNEALGSCSNKAYRKYEMEIARR
IRTITGTKENVRVKADELIKLISDSTCPQSISIAMFAQKVVSLCVNPTGSFNSAVYAYGR
VIVLVTSKVPLAMDVLIGELNKVCIYAVPKYIIYSEAAFQTKEAYYKAIGYAEEDGKIES
TDSYVDRLSAYMKLYGALVQTEVEGCQNLHGLREGWAWIARFLNVLPANLYTAAALQAFL
EMAGFALHKRYKTQFRKMLDIIAKDFLTALKDRGDAKLNKVIVNIRNYIESNQFLKEPEG
WRLRSNLESHNFTPESDHQQQYGYQQNRYYR

Transcript Sequence

Gene sequence data has not been registered.